Membrane Proteomics -- Keynotes on Membrane Proteomics -- Two-Dimensional BAC/SDS-PAGE for Membrane Proteomics -- Microparticles: A New Tool for Plasma Membrane Sub-cellular Proteomic -- Lipid Raft Proteomics: More than Just Detergent-Resistant Membranes -- Organelle Subproteomes -- Organelle Proteome Variation Among Different Cell Types: Lessons from Nuclear Membrane Proteins -- Synaptosome Proteomics -- Proteomic Analysis of Secreted Exosomes -- Characterization of Supramolecular Protein Complexes -- From Protein-Protein Complexes to Interactomics -- Supramolecular Signalling Complexes in the Nervous System -- Protein Networks and Complexes in Photoreceptor Cilia -- Subcellular Systems Biology -- Systems Biology and the Reconstruction of the Cell: From Molecular Components to Integral Function -- Automated, Systematic Determination of Protein Subcellular Location using Fluorescence Microscopy -- Systems Biology of the Endoplasmic Reticulum Stress Response -- Emerging Technologies in Proteomics -- Systems Nanobiology: From Quantitative Single Molecule Biophysics to Microfluidic-Based Single Cell Analysis -- Biophotonics Applied to Proteomics -- Differential Epitope Identification of Antibodies Against Intracellular Domains of Alzheimer's Amyloid Precursor Protein Using High Resolution Affinity-mass Spectrometry -- LC-MALDI MS and MS/MS - An Efficient Tool in Proteome Analysis.